Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920802.1_cds_XP_016469878.1_62382
CDS Infomation

[gene=LOC107792199] [db_xref=GeneID:107792199] [protein=UDP-glucuronate:xylan alpha-glucuronosyltransferase 1-like isoform X3] [protein_id=XP_016469878.1] [location=join(114983..115002,116684..116887,118064..118674,118764..119812)] [gbkey=CDS]
Sequence

ATGGAGGCTAGAAGATCAATAGAAGATGCATGCAAAAGAAGGTTACAGAAAATCAAAGTT
AAGGAAGTGGGAGTGAAGCCCCTTCAACTCCCCTTTCAAGAGAAGAGTACAAATTGCAAG
TTCCATCCTCTAAAGCTTGTGTTATTTCTCATTGTAATTGGCACTTTCTTCTTGATTCTC
TCCTCCAACTCCGTTTGTCAAAATAAAAATGCTTCAGATTCAAGGTGGATATGGGGTGCT
TCTGATCCTAGGTACATATCAGATGTTGACATCAGTTGGGAGGAAATATCTCAAGTTTTA
GAACAATTGCCTGAAAAGAAAGTTGTTGAGAACATAGGTCTTCTTAATTTCGACGAAGAT
GAAATCATTGAATGGAGACAAGTTGTTCCTAGTGCCAACCAAACAGTCCTTCACCTTGAC
TATGCCGAAAAAAACATAACTTGGGAAACCTTGTACCCTGAGTGGATTGATGAAGAACAA
GAAAATGAAGTTCCAAGTTGTCCTTCTTTGCCAAAACTTGAAGTCCCTAGGACTCGTATC
GATCTCATAGCTGTCAAGTTACCGTGTAGAAATGAAGGGAATTGGTCTAGAGATGTTGCG
CGATTGCACTTGCAACTTGCTGCTGGTGGTTTAGCTTCCTCTGTTAAGGGTAAACATCCT
GTCCATTTGCTTTTCATAACCAAATGCTTCCCTATACCGAATCTTTATAGGTGCAACGAG
CTCGTTGCTAGAAAAGGTAACGCGTGGTTGTACAAGCCGGATTTGAGTGTTCTAAGAGAA
AAACTTCAACTTCCTGTTGGATCTTGTGAACTTGCACTTCCCTTTGGTAAAACAGCAGAG
GAAGAACATTCGGGGAGCAAAAGGCGCGAGGCTTATGCAACGATATTGCATTCAGCTCAT
GTATATGTATGTGGAGCAATAGCAGCAGCACAAAGCATTAGAATGGCAGGGTCGAGGCGA
GACCTTGTGATTCTCGTTGATGATTCGATTGGTGAGTATCATAGGAGTGGACTTGAAGCA
GCAGGCTGGCAAGTTAGGACTATACAAAGAATAAGAAATCCTAAAGCTGAGAAAGATGCC
TACAACGAGTGGAATTACAGCAAATTCAGGCTATGGCAACTGACTGATTATGACAAGATC
ATATTCATTGATGCTGATCTTCTTATACTTAGAAACATCGATATCTTATTTAGGATGCCA
CAGATTTCAGCGACAGGAAACAATGGCACGCTTTTTAACTCTGGAGTCATGGTTATCGAG
CCATCAAATTGCACGTTTCAGCTCCTAATGGATCACATAAATGAGATTGAGTCCTATAAT
GGAGGCGATCAAGGCTACCTAAACGAAATATTCACGTGGTGGCATCGGATACCAAAGCAT
ATGAACTTCTTGAAAAATTTCTGGATTGGCGACGATGAAGTAGTGAAAGCAAAGAAAACA
CATCTTTTCGGGGCAGAACCTCCAATTCTTTATGTCCTTCACTACCTCGGATACAAGCCA
TGGTTGTGTTTCCGGGACTATGATTGCAACTGGAATGTAGACATCTTACAAGAATTCGCG
AGTGATGTTGCACATCACAAGTGGTGGAAAGTGCACGATGCAATGCCCGAGCAGCTGCAA
GATTTTTGCCTGCTAAGATCAAAGCAGAAGGCACAATTGGAATGGGATAGAAGGGAAGCA
GAGAAGGCAAAATATGTTGATGGACATTGGAAAATCAAGATCAAAGATCGACGACTCAAG
AGATGTACAGACAGGTTATGCAATTGGAAGGGTATGTTAAAGCACTGGGGGCAGAAAAAT
TGGACAGATGATCCATTTTTTCATCCCTCACCACCAACCTTAAAAACCAACAAAACCAAA
ACAGCATCTCTTTCTGGTATATAA

Peptide Sequence

PEP ID

XP_016469878.1
PEP Infomation

PREDICTED: UDP-glucuronate:xylan alpha-glucuronosyltransferase 1-like isoform X3 [Nicotiana tabacum]
Sequence

MEARRSIEDACKRRLQKIKVKEVGVKPLQLPFQEKSTNCKFHPLKLVLFLIVIGTFFLIL
SSNSVCQNKNASDSRWIWGASDPRYISDVDISWEEISQVLEQLPEKKVVENIGLLNFDED
EIIEWRQVVPSANQTVLHLDYAEKNITWETLYPEWIDEEQENEVPSCPSLPKLEVPRTRI
DLIAVKLPCRNEGNWSRDVARLHLQLAAGGLASSVKGKHPVHLLFITKCFPIPNLYRCNE
LVARKGNAWLYKPDLSVLREKLQLPVGSCELALPFGKTAEEEHSGSKRREAYATILHSAH
VYVCGAIAAAQSIRMAGSRRDLVILVDDSIGEYHRSGLEAAGWQVRTIQRIRNPKAEKDA
YNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDILFRMPQISATGNNGTLFNSGVMVIE
PSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPKHMNFLKNFWIGDDEVVKAKKT
HLFGAEPPILYVLHYLGYKPWLCFRDYDCNWNVDILQEFASDVAHHKWWKVHDAMPEQLQ
DFCLLRSKQKAQLEWDRREAEKAKYVDGHWKIKIKDRRLKRCTDRLCNWKGMLKHWGQKN
WTDDPFFHPSPPTLKTNKTKTASLSGI

Transcript Sequence

Gene sequence data has not been registered.